SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_081800488
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Ovary
Biosample name: High-grade serous ovarian cancer
Genomic region: chr12:54257299-54289458
Size: 32159
Super-enhancer rank 488
Number of SE elements: 8
ChIP density(Case|Control): 30078.3127|2495.5384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5 ;
ROSE Overlap CBX5 ; HNRNPA1 ;
ROSE Proximal COPZ1 ; NFE2 ; MIR3198-2 ; MIR148B ;
ROSE Closest CBX5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CBX5 ; SMUG1 ; COPZ1 ; NFE2 ; LOC102724050 ; HNRNPA1 ; MIR3198-2 ; MIR148B ; GPR84 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_081800488 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers