SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_080000217
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Brain
Biosample name: 3679
Genomic region: chr5:132257136-132269254
Size: 12118
Super-enhancer rank 217
Number of SE elements: 5
ChIP density(Case|Control): 45653.3532|2587.193
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDLIM4;
ROSE Overlap PDLIM4;
ROSE Proximal MIR6830; PDLIM4; P4HA2; SLC22A4;
ROSE Closest PDLIM4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_080000217 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers