SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_078900012
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Brain
Biosample name: 3752
Genomic region: chr19:12983023-13099081
Size: 116058
Super-enhancer rank 12
Number of SE elements: 29
ChIP density(Case|Control): 294346.2996|9795.2952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NFIX;
ROSE Overlap NFIX; LYL1;
ROSE Proximal FARSA; DAND5; MIR6515; RAD23A; GADD45GIP1; CALR; TRMT1; NACC1;
ROSE Closest NFIX;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078900012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers