SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_078200808
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MEC1
Genomic region: chr19:18284617-18307911
Size: 23294
Super-enhancer rank 808
Number of SE elements: 4
ChIP density(Case|Control): 21174.246|1637.5682
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3188 ;
ROSE Overlap LSM4 ;
ROSE Proximal PDE4C ; JUND ; PGPEP1 ; LOC729966 ; MIR3188 ; KIAA1683 ;
ROSE Closest MIR3188 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LSM4 ; PDE4C ; MIR3189 ; GDF15 ; JUND ; KIAA1683 ; LOC729966 ; PGPEP1 ; RAB3A ; MIR3188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078200808 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers