SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_078200559
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MEC1
Genomic region: chr2:218870832-218910131
Size: 39299
Super-enhancer rank 559
Number of SE elements: 9
ChIP density(Case|Control): 28185.2428|3281.4665
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WNT10A ;
ROSE Overlap LINC01494 ; WNT10A ; WNT6 ;
ROSE Proximal MIR9500 ; CDK5R2 ; PRKAG3 ;
ROSE Closest WNT10A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CDK5R2 ; LINC00608 ; PRKAG3 ; WNT6 ; MIR9500 ; WNT10A ; LINC01494 ; FEV ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078200559 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers