SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_078200513
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MEC1
Genomic region: chr17:40310985-40330831
Size: 19846
Super-enhancer rank 513
Number of SE elements: 3
ChIP density(Case|Control): 27913.399|1686.91
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA ;
ROSE Overlap RARA ;
ROSE Proximal RARA-AS1 ; RARA ; CDC6 ; GJD3 ;
ROSE Closest RARA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RARA ; RARA-AS1 ; TOP2A ; GJD3 ; CDC6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078200513 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers