SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_078200048
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MEC1
Genomic region: chr12:6942882-6963337
Size: 20455
Super-enhancer rank 48
Number of SE elements: 1
ChIP density(Case|Control): 73376.176|1904.3605
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPN6 ;
ROSE Overlap C12orf57 ; PTPN6 ; RNU7-1 ;
ROSE Proximal MIR141 ; ENO2 ; MIR200C ; SCARNA12 ; PHB2 ; LRRC23 ; C12orf57 ; ATN1 ; EMG1 ;
ROSE Closest PTPN6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTPN6 ; C12orf57 ; MIR141 ; LPCAT3 ; TPI1 ; ENO2 ; MIR200C ; ATN1 ; EMG1 ; RNU7-1 ; SPSB2 ; PHB2 ; SCARNA12 ; LRRC23 ; DSTNP2 ; RPL13P5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_078200048 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers