SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600990
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr6:27834193-27839999
Size: 5806
Super-enhancer rank 990
Number of SE elements: 1
ChIP density(Case|Control): 13110.5286|556.2148
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2AK ;
ROSE Overlap HIST1H2AK ; HIST1H2BN ;
ROSE Proximal HIST1H2AL ; HIST1H3I ; HIST1H2BM ; HIST1H2AJ ; HIST1H2AI ; HIST1H4K ; HIST1H4L ; HIST1H2BL ; HIST1H4J ; HIST1H1B ; HIST1H3H ;
ROSE Closest HIST1H2AK ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIST1H4L ; OR2B2 ; HIST1H2BO ; HIST1H2AI ; HIST1H2AJ ; LOC100131289 ; HIST1H3H ; HIST1H4K ; HIST1H3I ; HIST1H2BL ; HIST1H2BN ; HIST1H2BM ; HIST1H2AK ; HIST1H2AL ; HIST1H2AM ; HIST1H1B ; HIST1H3J ; HIST1H4J ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600990 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers