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Super-enhancer overview

SE ID: SE_02_075600977
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr16:3006666-3011291
Size: 4625
Super-enhancer rank 977
Number of SE elements: 1
ChIP density(Case|Control): 12961.1|285.825
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN9;
ROSE Overlap ;
ROSE Proximal LOC100128770; PKMYT1; MMP25-AS1; THOC6; CCDC64B; CLDN9; MMP25; LOC101929613; TNFRSF12A; CLDN6; PAQR4; KREMEN2; HCFC1R1; LINC00514;
ROSE Closest CLDN9;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600977 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers