SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600943
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr12:57834743-57853561
Size: 18818
Super-enhancer rank 943
Number of SE elements: 7
ChIP density(Case|Control): 14252.7532|1328.5508
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTDSP2 ;
ROSE Overlap CTDSP2 ;
ROSE Proximal MIR26A2 ; AVIL ;
ROSE Closest CTDSP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA METTL1 ; CYP27B1 ; METTL21B ; TSFM ; LOC100506844 ; CTDSP2 ; TSPAN31 ; XRCC6BP1 ; MARCH9 ; AVIL ; MIR6759 ; MIR26A2 ; CDK4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600943 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers