SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600858
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr6:42780657-42790965
Size: 10308
Super-enhancer rank 858
Number of SE elements: 7
ChIP density(Case|Control): 14195.1468|538.0776
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GLTSCR1L ;
ROSE Overlap ;
ROSE Proximal TBCC ; GLTSCR1L ;
ROSE Closest GLTSCR1L ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ATP6V0CP3 ; PRPH2 ; TBCC ; GLTSCR1L ; RPL7L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600858 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers