SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_075600775
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr12:109726117-109752943
Size: 26826
Super-enhancer rank 775
Number of SE elements: 7
ChIP density(Case|Control): 16012.4394|1660.5294
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM222A ;
ROSE Overlap FAM222A ; FAM222A-AS1 ;
ROSE Proximal ;
ROSE Closest FAM222A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRPV4 ; FAM222A ; FAM222A-AS1 ; MIR4497 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600775 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers