SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600530
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr12:6363426-6381559
Size: 18133
Super-enhancer rank 530
Number of SE elements: 6
ChIP density(Case|Control): 19146.6347|1256.6169
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCNN1A ;
ROSE Overlap LTBR ; SCNN1A ;
ROSE Proximal LTBR ; TNFRSF1A ;
ROSE Closest SCNN1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SCNN1A ; PLEKHG6 ; CD27-AS1 ; VAMP1 ; LTBR ; TNFRSF1A ; CD27 ; TAPBPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600530 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers