SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600486
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr11:57760988-57801492
Size: 40504
Super-enhancer rank 486
Number of SE elements: 6
ChIP density(Case|Control): 22082.7808|3268.6728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTNND1 ;
ROSE Overlap CTNND1 ; TMX2-CTNND1 ;
ROSE Proximal CTNND1 ; BTBD18 ; TMX2 ; C11orf31 ; MED19 ;
ROSE Closest CTNND1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CTNND1 ; TMX2 ; TMX2-CTNND1 ; C11orf31 ; MED19 ; BTBD18 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600486 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers