SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600435
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr10:102112575-102123159
Size: 10584
Super-enhancer rank 435
Number of SE elements: 3
ChIP density(Case|Control): 20639.8584|745.1136
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LDB1 ;
ROSE Overlap LDB1 ;
ROSE Proximal HPS6 ; PPRC1 ; NOLC1 ;
ROSE Closest LDB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NOLC1 ; C10orf76 ; PPRC1 ; HPS6 ; LDB1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600435 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers