SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_075600299
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr1:211219810-211226759
Size: 6949
Super-enhancer rank 299
Number of SE elements: 4
ChIP density(Case|Control): 24497.3097|772.0339
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCOR3 ;
ROSE Overlap ;
ROSE Proximal RCOR3 ;
ROSE Closest RCOR3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RCOR3 ; KCNH1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600299 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers