SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600080
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr12:31361500-31388425
Size: 26925
Super-enhancer rank 80
Number of SE elements: 7
ChIP density(Case|Control): 43836.5925|2434.02
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM60A ;
ROSE Overlap DENND5B ;
ROSE Proximal FAM60A ; FLJ13224 ;
ROSE Closest FAM60A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FLJ13224 ; FAM60A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600080 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers