SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_075500547
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE FOXA2 -/-
Genomic region: chr1:225408049-225429432
Size: 21383
Super-enhancer rank 547
Number of SE elements: 2
ChIP density(Case|Control): 27222.6973|1967.236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LBR;
ROSE Overlap LBR;
ROSE Proximal ;
ROSE Closest LBR;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075500547 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers