SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_075500541
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE FOXA2 -/-
Genomic region: chr2:64049954-64087734
Size: 37780
Super-enhancer rank 541
Number of SE elements: 9
ChIP density(Case|Control): 29181.272|3736.442
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS54;
ROSE Overlap ;
ROSE Proximal VPS54;
ROSE Closest VPS54;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075500541 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers