SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_075500517
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE FOXA2 -/-
Genomic region: chr12:6321901-6343563
Size: 21662
Super-enhancer rank 517
Number of SE elements: 5
ChIP density(Case|Control): 27850.8334|1884.594
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF1A;
ROSE Overlap TNFRSF1A; PLEKHG6;
ROSE Proximal LTBR; SCNN1A;
ROSE Closest TNFRSF1A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075500517 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers