SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_075500078
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE FOXA2 -/-
Genomic region: chr13:99967513-99992377
Size: 24864
Super-enhancer rank 78
Number of SE elements: 4
ChIP density(Case|Control): 62841.2736|1889.664
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZIC2;
ROSE Overlap ZIC2; ZIC5;
ROSE Proximal LOC101927437; LINC00554;
ROSE Closest ZIC2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075500078 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers