SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_075200606
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE_wild type
Genomic region: chr3:140198276-140220088
Size: 21812
Super-enhancer rank 606
Number of SE elements: 4
ChIP density(Case|Control): 30063.4796|2301.166
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLSTN2;
ROSE Overlap CLSTN2;
ROSE Proximal ;
ROSE Closest CLSTN2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075200606 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers