SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074801084
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr12:6363018-6376216
Size: 13198
Super-enhancer rank 1084
Number of SE elements: 3
ChIP density(Case|Control): 31636.9258|1234.013
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCNN1A ;
ROSE Overlap LTBR ; SCNN1A ;
ROSE Proximal LTBR ; TNFRSF1A ;
ROSE Closest SCNN1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SCNN1A ; PLEKHG6 ; CD27-AS1 ; LTBR ; TNFRSF1A ; CD27 ; TAPBPL ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074801084 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers