SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074801039
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr20:50646982-50671520
Size: 24538
Super-enhancer rank 1039
Number of SE elements: 5
ChIP density(Case|Control): 34434.1754|3214.478
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100506175 ;
ROSE Overlap LOC100506175 ; FAM65C ;
ROSE Proximal MIR1302-5 ; FAM65C ;
ROSE Closest LOC100506175 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM65C ; MIR1302-5 ; MIR645 ; LOC100506175 ; PARD6B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074801039 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers