SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074801023
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:7257737-7269319
Size: 11582
Super-enhancer rank 1023
Number of SE elements: 4
ChIP density(Case|Control): 32474.7698|815.3728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN7 ;
ROSE Overlap ELP5 ; CLDN7 ;
ROSE Proximal EIF5A ; GABARAP ; ACADVL ; SLC2A4 ; DLG4 ; GPS2 ; PHF23 ; MIR324 ; CTDNEP1 ; YBX2 ; CLDN7 ; DVL2 ;
ROSE Closest CLDN7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PHF23 ; ELP5 ; DVL2 ; SLC2A4 ; KCTD11 ; ACADVL ; DLG4 ; EIF5A ; CTDNEP1 ; TMEM95 ; GPS2 ; NEURL4 ; CLDN7 ; ASGR1 ; ACAP1 ; YBX2 ; MIR324 ; GABARAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074801023 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers