SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074801022
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr16:382094-388128
Size: 6034
Super-enhancer rank 1022
Number of SE elements: 1
ChIP density(Case|Control): 32076.744|386.176
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100134368 ;
ROSE Overlap LOC100134368 ;
ROSE Proximal DECR2 ; NME4 ; RAB11FIP3 ; AXIN1 ; MRPL28 ; TMEM8A ;
ROSE Closest LOC100134368 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NME4 ; RAB11FIP3 ; AXIN1 ; MRPL28 ; DECR2 ; LOC100134368 ; TMEM8A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074801022 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers