SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074801015
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr9:113339333-113351841
Size: 12508
Super-enhancer rank 1015
Number of SE elements: 3
ChIP density(Case|Control): 33691.5488|1771.1328
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BSPRY ;
ROSE Overlap BSPRY ; WDR31 ;
ROSE Proximal RNF183 ; HDHD3 ; ALAD ;
ROSE Closest BSPRY ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HDHD3 ; POLE3 ; BSPRY ; RGS3 ; CDC26 ; ALAD ; PRPF4 ; WDR31 ; C9orf43 ; RNF183 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074801015 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers