SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800986
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr9:128859954-128898949
Size: 38995
Super-enhancer rank 986
Number of SE elements: 10
ChIP density(Case|Control): 38359.3815|5786.858
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCBL1 ;
ROSE Overlap CCBL1 ; LRRC8A ;
ROSE Proximal ENDOG ; PHYHD1 ; CCBL1 ; NUP188 ; C9orf114 ; DOLK ;
ROSE Closest CCBL1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ENDOG ; TBC1D13 ; PHYHD1 ; CCBL1 ; LRRC8A ; DOLK ; C9orf114 ; NUP188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800986 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers