SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800953
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:18278711-18293557
Size: 14846
Super-enhancer rank 953
Number of SE elements: 2
ChIP density(Case|Control): 34836.139|1343.563
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3188 ;
ROSE Overlap MIR3188 ; JUND ;
ROSE Proximal PDE4C ; LSM4 ; JUND ; PGPEP1 ; LOC729966 ; KIAA1683 ;
ROSE Closest MIR3188 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LSM4 ; PDE4C ; MPV17L2 ; JUND ; KIAA1683 ; LOC729966 ; PGPEP1 ; RAB3A ; MIR3188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800953 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers