SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800948
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr12:12713794-12726924
Size: 13130
Super-enhancer rank 948
Number of SE elements: 1
ChIP density(Case|Control): 34013.265|361.075
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDKN1B ;
ROSE Overlap CDKN1B ; APOLD1 ;
ROSE Proximal MIR613 ; GPR19 ;
ROSE Closest CDKN1B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR613 ; DDX47 ; APOLD1 ; CDKN1B ; GPR19 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800948 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers