SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800931
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:1097285-1112735
Size: 15450
Super-enhancer rank 931
Number of SE elements: 4
ChIP density(Case|Control): 34714.605|747.78
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPX4 ;
ROSE Overlap GPX4 ; SBNO2 ;
ROSE Proximal POLR2E ; HMHA1 ;
ROSE Closest GPX4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPX4 ; RNU6-7 ; CNN2 ; HMHA1 ; RNU6-9 ; RNU6-1 ; ABCA7 ; TMEM259 ; RNU6-8 ; POLR2E ; RNU6-2 ; SBNO2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800931 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers