SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800924
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr15:40842978-40848368
Size: 5390
Super-enhancer rank 924
Number of SE elements: 1
ChIP density(Case|Control): 34910.491|698.005
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPINT1 ;
ROSE Overlap SPINT1 ;
ROSE Proximal RHOV ; ZFYVE19 ; PPP1R14D ; DNAJC17 ; VPS18 ;
ROSE Closest SPINT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GCHFR ; DLL4 ; PPP1R14D ; VPS18 ; SPINT1 ; RMDN3 ; ZFYVE19 ; RHOV ; DNAJC17 ; C15orf62 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800924 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers