SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800919
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:171771039-171812292
Size: 41253
Super-enhancer rank 919
Number of SE elements: 12
ChIP density(Case|Control): 39433.7427|5102.9961
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLD1 ;
ROSE Overlap PLD1 ;
ROSE Proximal TMEM212 ; PLD1 ;
ROSE Closest PLD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLD1 ; TMEM212 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800919 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers