SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800915
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:7833929-7845495
Size: 11566
Super-enhancer rank 915
Number of SE elements: 2
ChIP density(Case|Control): 35080.8346|619.9376
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KDM6B ;
ROSE Overlap KDM6B ;
ROSE Proximal CYB5D1 ; CHD3 ; TMEM88 ; NAA38 ;
ROSE Closest KDM6B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM88 ; CHD3 ; TRAPPC1 ; CNTROB ; LOC284023 ; SCARNA21 ; NAA38 ; KDM6B ; CYB5D1 ; KCNAB3 ; RPL29P2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800915 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers