SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800911
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:29218090-29249845
Size: 31755
Super-enhancer rank 911
Number of SE elements: 4
ChIP density(Case|Control): 37455.0225|2848.4235
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPRU ;
ROSE Overlap PTPRU ; MECR ;
ROSE Proximal SRSF4 ; PTPRU ;
ROSE Closest PTPRU ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTPRU ; MECR ; SRSF4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800911 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers