SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800905
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr2:74439882-74443202
Size: 3320
Super-enhancer rank 905
Number of SE elements: 1
ChIP density(Case|Control): 35572.804|820.372
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RTKN ;
ROSE Overlap RTKN ;
ROSE Proximal TTC31 ; MOGS ; INO80B ; C2orf81 ; DCTN1 ; RTKN ; WDR54 ; WBP1 ; CCDC142 ; MRPL53 ;
ROSE Closest RTKN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DQX1 ; AUP1 ; RTKN ; DCTN1 ; WDR54 ; TTC31 ; HTRA2 ; CCDC142 ; DCTN1-AS1 ; MOGS ; WBP1 ; LBX2-AS1 ; INO80B-WBP1 ; LBX2 ; SLC4A5 ; TLX2 ; C2orf81 ; INO80B ; PCGF1 ; MRPL53 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800905 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers