SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800897
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr9:35831306-35846474
Size: 15168
Super-enhancer rank 897
Number of SE elements: 3
ChIP density(Case|Control): 36697.4592|1824.7104
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM8B ;
ROSE Overlap TMEM8B ;
ROSE Proximal NPR2 ; LINC00950 ; HINT2 ; SPAG8 ; OR13J1 ; FAM221B ;
ROSE Closest TMEM8B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NPR2 ; MSMP ; TMEM8B ; SPAG8 ; OR13J1 ; LINC00961 ; FAM221B ; HRCT1 ; GBA2 ; HINT2 ; LINC00950 ; RGP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800897 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers