SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800871
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr8:142674350-142681090
Size: 6740
Super-enhancer rank 871
Number of SE elements: 1
ChIP density(Case|Control): 37608.526|1875.068
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSCA ;
ROSE Overlap PSCA ;
ROSE Proximal THEM6 ; JRK ; LOC100288181 ; LY6K ;
ROSE Closest PSCA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLURP1 ; PSCA ; ARC ; THEM6 ; LYNX1 ; JRK ; LYPD2 ; LY6K ; LOC100288181 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800871 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers