SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800841
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr11:65180524-65185328
Size: 4804
Super-enhancer rank 841
Number of SE elements: 1
ChIP density(Case|Control): 37283.844|697.0604
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CAPN1 ;
ROSE Overlap CAPN1 ;
ROSE Proximal SYVN1 ; SPDYC ; SLC22A20 ;
ROSE Closest CAPN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC22A20 ; CAPN1 ; POLA2 ; MIR6751 ; MRPL49 ; TM7SF2 ; SPDYC ; TMEM262 ; ZFPL1 ; CDCA5 ; SYVN1 ; VPS51 ; FAU ; ZNHIT2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800841 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers