SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800831
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:80020234-80032553
Size: 12319
Super-enhancer rank 831
Number of SE elements: 2
ChIP density(Case|Control): 38344.1194|1453.642
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D16 ;
ROSE Overlap TBC1D16 ;
ROSE Proximal CCDC40 ;
ROSE Closest TBC1D16 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC101928766 ; TBC1D16 ; CCDC40 ; GAA ; MIR1268B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800831 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers