SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800830
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr12:120528465-120552875
Size: 24410
Super-enhancer rank 830
Number of SE elements: 6
ChIP density(Case|Control): 39109.702|2216.428
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF10 ;
ROSE Overlap RNF10 ; COQ5 ;
ROSE Proximal POP5 ; DYNLL1 ; NRAV ;
ROSE Closest RNF10 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GATC ; NRAV ; TRIAP1 ; DYNLL1 ; COQ5 ; POP5 ; SRSF9 ; CABP1 ; RNF10 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800830 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers