SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800828
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr13:99967600-99993002
Size: 25402
Super-enhancer rank 828
Number of SE elements: 6
ChIP density(Case|Control): 38235.0904|1313.2834
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZIC2 ;
ROSE Overlap ZIC2 ; ZIC5 ;
ROSE Proximal LOC101927437 ; LINC00554 ;
ROSE Closest ZIC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZIC5 ; LINC00554 ; LOC101927437 ; ZIC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800828 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers