SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800758
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:69077758-69092884
Size: 15126
Super-enhancer rank 758
Number of SE elements: 6
ChIP density(Case|Control): 40041.5472|1320.4998
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARL6IP5 ;
ROSE Overlap ARL6IP5 ; UBA3 ;
ROSE Proximal TMF1 ; UBA3 ; MIR3136 ; LMOD3 ;
ROSE Closest ARL6IP5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR3136 ; EOGT ; LMOD3 ; UBA3 ; ARL6IP5 ; TMF1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800758 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers