SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800742
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr18:9912803-9933975
Size: 21172
Super-enhancer rank 742
Number of SE elements: 4
ChIP density(Case|Control): 42032.7716|2549.1088
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VAPA ;
ROSE Overlap VAPA ;
ROSE Proximal TXNDC2 ; VAPA ;
ROSE Closest VAPA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TXNDC2 ; VAPA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800742 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers