SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800736
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:43930305-43947745
Size: 17440
Super-enhancer rank 736
Number of SE elements: 4
ChIP density(Case|Control): 42063.536|2249.76
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARTN ;
ROSE Overlap ST3GAL3 ; IPO13 ; ARTN ;
ROSE Proximal B4GALT2 ; CCDC24 ; ATP6V0B ; DPH2 ;
ROSE Closest ARTN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA B4GALT2 ; DPH2 ; SLC6A9 ; ARTN ; CCDC24 ; ATP6V0B ; IPO13 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800736 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers