SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800734
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:39736655-39770855
Size: 34200
Super-enhancer rank 734
Number of SE elements: 5
ChIP density(Case|Control): 45639.9|5749.02
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GRB7 ;
ROSE Overlap IKZF3 ; GRB7 ;
ROSE Proximal ERBB2 ; MIR4728 ; PGAP3 ; MIEN1 ;
ROSE Closest GRB7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GRB7 ; ERBB2 ; PGAP3 ; PNMT ; MIEN1 ; MIR4728 ; IKZF3 ; TCAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800734 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers