SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800727
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:19061158-19071110
Size: 9952
Super-enhancer rank 727
Number of SE elements: 2
ChIP density(Case|Control): 41538.6528|1516.6848
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD3B-1 ;
ROSE Overlap SNORD3B-1 ;
ROSE Proximal LOC79999 ; SNORD3D ; GRAP ;
ROSE Closest SNORD3B-1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD3D ; LOC79999 ; GRAP ; SNORD3B-1 ; LOC388436 ; GRAPL ; FAM83G ; SNORD3B-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800727 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers