SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800722
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr5:176533730-176544873
Size: 11143
Super-enhancer rank 722
Number of SE elements: 3
ChIP density(Case|Control): 42051.4534|1943.3392
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF44 ;
ROSE Overlap CDHR2 ; RNF44 ;
ROSE Proximal CDHR2 ;
ROSE Closest RNF44 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNCB ; RNF44 ; GPRIN1 ; FAF2 ; MIR4281 ; EIF4E1B ; CDHR2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800722 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers