SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800710
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:78171996-78201033
Size: 29037
Super-enhancer rank 710
Number of SE elements: 5
ChIP density(Case|Control): 44949.276|4442.661
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TK1 ;
ROSE Overlap AFMID ; TK1 ; SYNGR2 ;
ROSE Proximal C17orf99 ; BIRC5 ; TMC6 ; TMC8 ; TMEM235 ;
ROSE Closest TK1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM235 ; AFMID ; BIRC5 ; TMC6 ; TK1 ; TMC8 ; TNRC6C-AS1 ; LOC100996291 ; SYNGR2 ; C17orf99 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800710 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers