SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800703
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr22:39238815-39267599
Size: 28784
Super-enhancer rank 703
Number of SE elements: 5
ChIP density(Case|Control): 44039.52|3220.9296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDGFB ;
ROSE Overlap PDGFB ;
ROSE Proximal RNU86 ; SNORD83B ; SNORD83A ;
ROSE Closest PDGFB ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RPL3 ; SYNGR1 ; PDGFB ; RNU86 ; SNORD43 ; SNORD83B ; SNORD83A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800703 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers